Basic Information | |
---|---|
Taxon OID | 3300005977 Open in IMG/M |
Scaffold ID | Ga0081474_126801 Open in IMG/M |
Source Dataset Name | Ferrous microbial mat communities from One Hundred Spring Plain, Yellowstone National Park, USA |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 608 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
---|---|
Not Available | (Source: ) |
Source Dataset Ecosystem |
---|
Environmental → Aquatic → Non-Marine Saline And Alkaline → Unclassified → Unclassified → Ferrous Microbial Mat → Saline, Thermophilic Phototrophic And Chemotrophic Mat Microbial Communities From Various Locations In Usa And Mexico |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | One Hundred Spring Plain, Yellowstone National Park, Wyoming, USA | |||||||
Coordinates | Lat. (o) | 44.7330426 | Long. (o) | -110.7089928 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F076262 | Metagenome / Metatranscriptome | 118 | N |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0081474_1268011 | F076262 | AGGTGG | MSFNPVIKGSYTLAAPQSVSVAASSSSSVSISFTPLGAGELYVYITLPSGVTATISIGGQSVSLSNGGNQFVIPANTPIGNITINNSNTTAVTVVVWALFIEVA* |
⦗Top⦘ |