Basic Information | |
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Taxon OID | 3300006113 Open in IMG/M |
Scaffold ID | Ga0007858_1018527 Open in IMG/M |
Source Dataset Name | Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH08Aug08 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Bioenergy Institute (JBEI), DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1613 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (66.67%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater → Freshwater Microbial Communities From Crystal Bog Lake, Wisconsin, Usa |
Source Dataset Sampling Location | ||||||||
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Location Name | Crystal Bog, Wisconsin, USA | |||||||
Coordinates | Lat. (o) | 46.0072 | Long. (o) | -89.6063 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F091347 | Metagenome | 107 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0007858_10185271 | F091347 | GAGG | MAYSGTYNQTTVNVDQLISYAYRDAGRTAEEMTPELVNAGKQALFYVLQNSVNRGINIWLQKIEIIGAQTNQQFLTMPANCVDVLEANWVYITNPAVSGYLPADNGNVPALFDQTNNANLLLHATTTLSENYFGAAYGQGTRLFYIGFNAYSPNTTTTYSLDLQVSNDGINWTTWQSFPDATLSDFQWQYFQVNPTQG |
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