Basic Information | |
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Taxon OID | 3300006465 Open in IMG/M |
Scaffold ID | Ga0082250_10920415 Open in IMG/M |
Source Dataset Name | Deep-sea sediment bacterial and archaeal communities from Fram Strait - Hausgarten IX |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Center for Biotechnology (CeBiTec), Bielefeld Univeristy |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 564 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Caenispirillum → Caenispirillum salinarum | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Sediment → Sediment → Deep-Sea Sediment Bacterial And Archaeal Communities |
Source Dataset Sampling Location | ||||||||
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Location Name | Fram Strait | |||||||
Coordinates | Lat. (o) | 77.950787 | Long. (o) | -1.627126 | Alt. (m) | Depth (m) | 5500 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F028812 | Metagenome | 190 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0082250_109204151 | F028812 | N/A | SLRAMDQDLHHVIQQALEDARAAGRDHLTQTELAVRAVLQVRPDMTAPDALTAVNLVRRS |
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