Basic Information | |
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Taxon OID | 3300006709 Open in IMG/M |
Scaffold ID | Ga0031685_1170187 Open in IMG/M |
Source Dataset Name | Metatranscriptome of deep ocean microbial communities from Atlantic Ocean - MP727 (Metagenome Metatranscriptome) |
Source Dataset Category | Metatranscriptome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 651 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Eukaryota | (Source: Euk_MAG) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean → Deep Ocean Microbial Communities From The Global Malaspina Expedition |
Source Dataset Sampling Location | ||||||||
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Location Name | South Atlantic Ocean | |||||||
Coordinates | Lat. (o) | -31.83 | Long. (o) | 6.86 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F042859 | Metatranscriptome | 157 | N |
Protein ID | Family | RBS | Sequence |
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Ga0031685_11701871 | F042859 | N/A | AAITPACNMTEIANLLTPVFDLLQDEVVREKLEDSARVFFSNSNLTINLIPALIIGALGLLFLLPLLGIPILDILGGMMSDVVGGGHGNAYSAPSTGYGYVARGDTTYYDQTIADLQQQVAALQESEANLRSSLYYNNPVGEGAQATNNVGYSS* |
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