Basic Information | |
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Taxon OID | 3300006711 Open in IMG/M |
Scaffold ID | Ga0031673_1257391 Open in IMG/M |
Source Dataset Name | Metatranscriptome of deep ocean microbial communities from Pacific Ocean - MP2255 (Metagenome Metatranscriptome) |
Source Dataset Category | Metatranscriptome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 562 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae → Guillardia → Guillardia theta → Guillardia theta CCMP2712 | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean → Deep Ocean Microbial Communities From The Global Malaspina Expedition |
Source Dataset Sampling Location | ||||||||
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Location Name | West of El Salvador, Pacific Ocean | |||||||
Coordinates | Lat. (o) | 10.09 | Long. (o) | -99.25 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F021541 | Metagenome / Metatranscriptome | 218 | N |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0031673_12573912 | F021541 | N/A | YGKTAAGLYARAAGQNAKARQLYNASADTYYKANDAAAYDDWVRARNHWDYFYNRS* |
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