Basic Information | |
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Taxon OID | 3300006922 Open in IMG/M |
Scaffold ID | Ga0098045_1010500 Open in IMG/M |
Source Dataset Name | Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 2634 |
Total Scaffold Genes | 8 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 3 (37.50%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 2 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Viral Communities From The Subarctic Pacific Ocean And The Gulf Of Mexico |
Source Dataset Sampling Location | ||||||||
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Location Name | Pacific Ocean | |||||||
Coordinates | Lat. (o) | -14.205 | Long. (o) | -77.515 | Alt. (m) | Depth (m) | 20 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F056579 | Metagenome | 137 | N |
F058959 | Metagenome | 134 | N |
Protein ID | Family | RBS | Sequence |
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Ga0098045_10105002 | F058959 | N/A | MIEIRQKAERKFCNIGGLWYIFRKLLFAREVEVLIYFPDDMKNAHMSEKRAYKWKPILGFQGKGRSQDICFRTTSEGRILETAKTYEDERGRLLGVQEVKASSSKDIPVKAYMMSRRRGEWLPILPLHPYPSTSFRYRVAIRRIR* |
Ga0098045_10105006 | F056579 | N/A | MNQPNTYEEVMSNMVTEIEEGNESALQAFLSFRNIEKVAKDCMKQIEHLALGELSDHNGRLEQGDIVIESRSSAGRWKFTDDAHAALKQQLKDAEELRKQAHKLHLKGSEVIDPDTGEIVPPADYTPGKESIFISKARKS* |
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