Basic Information | |
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Taxon OID | 3300007000 Open in IMG/M |
Scaffold ID | Ga0102499_1002509 Open in IMG/M |
Source Dataset Name | Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1700(2)_T MetaT (Metagenome Metatranscriptome) (version 2) |
Source Dataset Category | Metatranscriptome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 726 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (66.67%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Anoxygenic And Chlorotrophic Microbial Mat → Anoxygenic And Chlorotrophic Microbial Mat Microbial Communities From Yellowstone National Park, Usa |
Source Dataset Sampling Location | ||||||||
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Location Name | Yellowstone National Park, Wyoming, USA | |||||||
Coordinates | Lat. (o) | 44.539 | Long. (o) | -110.798 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F043791 | Metagenome / Metatranscriptome | 155 | N |
Protein ID | Family | RBS | Sequence |
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Ga0102499_10025092 | F043791 | AGGAG | MIENVLVAGLATVYFAFVFTAKRGPFDFFAKIRATAKRVPVLGYHLSCPTCLSLSSGTLLFALTFTPLAFLVHIMAVAGIVLALHGMAGYWHSKDDE* |
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