Basic Information | |
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Taxon OID | 3300007777 Open in IMG/M |
Scaffold ID | Ga0105711_1393526 Open in IMG/M |
Source Dataset Name | Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS918_NRZ_DNA CLC_assembly |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Marine Biological Laboratory |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 632 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (66.67%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Vent Fluid, Hydrothermal Vents → Diffuse Hydrothermal Flow Volcanic Vent Microbial Communities From Axial Seamount, Northeast Pacific Ocean |
Source Dataset Sampling Location | ||||||||
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Location Name | North Rift Zone, Axial Seamount, northeast Pacific Ocean | |||||||
Coordinates | Lat. (o) | 46.0747 | Long. (o) | -129.995 | Alt. (m) | Depth (m) | 1716 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F025519 | Metagenome / Metatranscriptome | 201 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0105711_13935262 | F025519 | GGA | MKDNTWRYGSLKLSAMTYTFKCDNDKCYKSIICLMSKYDEREYFGRCSYCQSGRLKWIKNIDLFGVLSDAGFVYRKNKGVK* |
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