Basic Information | |
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Taxon OID | 3300007992 Open in IMG/M |
Scaffold ID | Ga0105748_10457392 Open in IMG/M |
Source Dataset Name | Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2um |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Oregon State University |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 555 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → Viruses → unclassified viruses → Circular genetic element sp. | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water → Microbial Communities From Columbia River Estuary, Oregon, Usa |
Source Dataset Sampling Location | ||||||||
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Location Name | Oregon, USA | |||||||
Coordinates | Lat. (o) | 46.235 | Long. (o) | -123.9123 | Alt. (m) | Depth (m) | 10.3 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F014449 | Metagenome | 263 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0105748_104573922 | F014449 | GAGG | MASYRTREGAITAADSFTALDSLYGQSTSSSVQVRAGTSAIVGIIASIATDSATNGAASFSMQLTGDGLTEQQTLTIGSQGVDGTPAS |
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