Basic Information | |
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Taxon OID | 3300008624 Open in IMG/M |
Scaffold ID | Ga0115652_1068665 Open in IMG/M |
Source Dataset Name | Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 200m, 250-2.7um |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Georgia Genomics Facility |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1196 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → Viruses → Predicted Viral | (Source: DeepVirFinder) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Coastal → Unclassified → Marine → Marine Water Column Microbial Communities Of The Permanently Stratified Cariaco Basin, Venezuela |
Source Dataset Sampling Location | ||||||||
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Location Name | Cariaco Basin, Venezuela | |||||||
Coordinates | Lat. (o) | 10.5 | Long. (o) | -64.66 | Alt. (m) | Depth (m) | 200 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F010943 | Metagenome | 297 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0115652_10686651 | F010943 | N/A | MTLKNKSAQDPDIDQKKREIREHLKGYRSSQTQDYMLHSGTTLHPDMKPIKDIVFYSFMVPPPEKERITDHEYKRLKISWSSIREHNTDIEIRFCYKSHPDYAPAKRIEIEEKWKDLCDDYGVEMYPFHESFTGNEPNAWCIHRWYNLALWKDEDLNVLYLDADTYINGDIQLVFDIYKRDPVYGREELGFRHDPNLGVSGEDPRFYLDLVDASIVAQGGKTEVQKYCLGVILLNHSVHKLFTEEILSDYTDLLERIHKFKVFYSIPNYRIMDEFAFWVLLSRWSLRTSLFGDQDVSQTFLEKKHEAHFNPII |
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