Basic Information | |
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Taxon OID | 3300009073 Open in IMG/M |
Scaffold ID | Ga0114957_1127046 Open in IMG/M |
Source Dataset Name | Marine algal microbial communities from Bantry Bay, Ireland - BantryBay_4 metaG |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 871 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Host-Associated → Algae → Red Algae → Unclassified → Unclassified → Marine → Genome And Metagenome Analysis Of Marine Red Algae Porphyra |
Source Dataset Sampling Location | ||||||||
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Location Name | Bantry Bay, Ireland | |||||||
Coordinates | Lat. (o) | 51.64 | Long. (o) | -9.71 | Alt. (m) | Depth (m) | 2 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F046156 | Metagenome | 151 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0114957_11270461 | F046156 | AGAAG | MASSTAVGPLPVLSDPPTWAPAWEREEARMGEADALARATFRGIDSVRPANPVAKHNAAMSHALVTSLDDRASSITVVRRSREVGYRRSHVGFMDDAPGDSPWAPSFAYILTSLPFIGASDKEDPTTVQSTTADNHHRGGLTGHLVARHRAEYLSCATATRSRLHLSTPAWCYGVEVPYGSMAELPWVPADTTDDLHTGRHTPWSILHIEWARLEAPLNKARMKHDGREGTTPRGCSSSECRRCRCVDGAGRHVSD |
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