Basic Information | |
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Taxon OID | 3300009104 Open in IMG/M |
Scaffold ID | Ga0117902_1436507 Open in IMG/M |
Source Dataset Name | Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Georgia Genomics Facility |
Sequencing Status | Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1143 |
Total Scaffold Genes | 5 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 3 (60.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia → unclassified Gimesia → Gimesia sp. | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Coastal → Unclassified → Marine → Marine Water Column Microbial Communities Of The Permanently Stratified Cariaco Basin, Venezuela |
Source Dataset Sampling Location | ||||||||
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Location Name | Cariaco Basin, Venezuela | |||||||
Coordinates | Lat. (o) | 10.5 | Long. (o) | -64.66 | Alt. (m) | Depth (m) | 143 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F018016 | Metagenome / Metatranscriptome | 237 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0117902_14365075 | F018016 | N/A | SEKIKIETPYGTIESDSGNHLVDIGTVVLIIVVCALLKIKGAFLMKKMFNR* |
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