Basic Information | |
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Taxon OID | 3300009150 Open in IMG/M |
Scaffold ID | Ga0114921_10119056 Open in IMG/M |
Source Dataset Name | Deep subsurface microbial communities from South Atlantic Ocean to uncover new lineages of life (NeLLi) - Benguela_00093 metaG |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1779 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface → Deep Subsurface Microbial Communities From Various Oceans To Uncover New Lineages Of Life (Nelli) |
Source Dataset Sampling Location | ||||||||
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Location Name | South Atlantic Ocean | |||||||
Coordinates | Lat. (o) | -27.74 | Long. (o) | 14.251 | Alt. (m) | Depth (m) | 1133 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F080661 | Metagenome | 115 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0114921_101190562 | F080661 | N/A | MKSFERIWAALNLEEPDRIPTHTINIDGNVADQILGRPKRNAFDIFDELEKKYPNDWVDKINDILLDIEISTFSKAVRAGYDLGFDGVGVQYIPFILESLTEMTDIFGKRHKVRNIEGNPYPDYYGGYIKNREDWEAYPKPDMKEEYNKAKKFYKGVLRKCRDIKDDIYIFAQNALTSVFPPVWQGMGMPYFARALKNDPKLIEERFRF |
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