Basic Information | |
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Taxon OID | 3300009195 Open in IMG/M |
Scaffold ID | Ga0103743_1021446 Open in IMG/M |
Source Dataset Name | Eukaryotic and microbial communities from ice edge, McMurdo Sound, Antarctica - 4C |
Source Dataset Category | Metatranscriptome |
Source Dataset Use Policy | Open |
Sequencing Center | J. Craig Venter Institute (JCVI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 897 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Unclassified → Ice Edge, Mcmurdo Sound, Antarctica → Eukaryotic And Microbial Communities From Ice Edge, Mcmurdo Sound, Antarctica |
Source Dataset Sampling Location | ||||||||
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Location Name | Ice edge, McMurdo Sound, Antarctica | |||||||
Coordinates | Lat. (o) | -77.36 | Long. (o) | 164.28 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F048083 | Metatranscriptome | 148 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0103743_10214461 | F048083 | N/A | SFAMRFSAASVVLASAVFNVTRCPLPHEIQAADLADRFDLYGNYPGMYYELAFHDVLQFVCPKVSCVNTNKTLQKYADGQEYVNEAWGLKCLGHDYPQVLLNNVTDTPGHFEAFVDAGKLGKLTGLLGNVIFPNTVIDFVPGDAGWTVEFQCVEIPVLGVVYTGINYYSKNTTEEAFQDMDAAAKRAGIDFYFTRPFGPTLRRVPQDDCAFDSVIV* |
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