Basic Information | |
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Taxon OID | 3300009269 Open in IMG/M |
Scaffold ID | Ga0103876_1016525 Open in IMG/M |
Source Dataset Name | Eukaryotic communities of water from the North Atlantic ocean - ACM28 |
Source Dataset Category | Metatranscriptome |
Source Dataset Use Policy | Open |
Sequencing Center | University of Georgia |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 837 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia → Choreotrichida → Strombidinopsidae → Strombidinopsis → Strombidinopsis acuminata | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Unclassified → Surface Ocean Water → Eukaryotic Communities Of Water From Amazon River, Brazil And North Atlantic Ocean |
Source Dataset Sampling Location | ||||||||
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Location Name | North Pacific Ocean | |||||||
Coordinates | Lat. (o) | Long. (o) | Alt. (m) | Depth (m) | Location on Map | |||
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F000147 | Metagenome / Metatranscriptome | 1917 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0103876_10165251 | F000147 | N/A | FGCEEYRAYSDVETWIAPGKVNTIKVNDVNGDFHFAKRKKAGTWVNSNMHIAAWKAIKDEGVWAKYDWTVKSDIDAIFIPIRLRNKLGQVEVTDNGIYLENCKWEYYGFFGALEVISHDGVGTLINNLDDCKASLNYKEGQKSTGMQPWGEDLFVQRCMDLHKVDKVAAYDISTDAACQAYRPKDQRKNTKWKPDCATTKTAGIHHFKKPEDYFECLKATQR* |
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