Basic Information | |
---|---|
Taxon OID | 3300009400 Open in IMG/M |
Scaffold ID | Ga0116854_1133656 Open in IMG/M |
Source Dataset Name | Soil microbial community of the Robinson Ridge, Antarctica. Combined Assembly of Gp0139162, Gp0138857, Gp0138858 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | University of Queensland |
Sequencing Status | Permanent Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 743 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
---|---|
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA6 | (Source: UniRef50) |
Source Dataset Ecosystem |
---|
Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Soil Microbial Community Of The Robinson Ridge, Antarctica |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | Robinson Ridge, Antarctica | |||||||
Coordinates | Lat. (o) | -66.369451 | Long. (o) | 110.585574 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F011839 | Metagenome / Metatranscriptome | 286 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0116854_11336562 | F011839 | GAGG | MKPAPAPNVPGNTEAERFDNAVRKIFSVSKGDLLKQEAKWKRAQARKKRAKKTP* |
⦗Top⦘ |