Basic Information | |
---|---|
Taxon OID | 3300009411 Open in IMG/M |
Scaffold ID | Ga0115017_1426141 Open in IMG/M |
Source Dataset Name | Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_OS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) |
Source Dataset Category | Metatranscriptome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 564 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
---|---|
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Trombidiformes → Prostigmata → Eupodina → Bdelloidea | (Source: UniRef50) |
Source Dataset Ecosystem |
---|
Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil → Forest Soil Microbial Communities From France, Sweden, Spain And Usa, For Metatranscriptomics Studies |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | South-western Pyrenees, Aspurz, Spain | |||||||
Coordinates | Lat. (o) | 42.0 | Long. (o) | 1.0 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F006177 | Metagenome / Metatranscriptome | 379 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0115017_14261411 | F006177 | N/A | RTGYRRAMRPGRRYPIRPIVPVVPVPPPRTRGLAGIIGGLAGLLLCLLCLATLGLLGLFATFIAVTAYLGDVYRALRDQDNSASGYYVNMVILLAALCFAGYHKLHRSL* |
⦗Top⦘ |