Basic Information | |
---|---|
Taxon OID | 3300009481 Open in IMG/M |
Scaffold ID | Ga0114932_10075153 Open in IMG/M |
Source Dataset Name | Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 2126 |
Total Scaffold Genes | 5 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 5 (100.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
---|---|
Not Available | (Source: ) |
Source Dataset Ecosystem |
---|
Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface → Deep Subsurface Microbial Communities From Various Oceans To Uncover New Lineages Of Life (Nelli) |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | Kolumbo volcano, Aegean Sea | |||||||
Coordinates | Lat. (o) | 36.5264 | Long. (o) | 25.4868 | Alt. (m) | Depth (m) | 470 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F090263 | Metagenome | 108 | N |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0114932_100751533 | F090263 | GGA | MSAVIVDDGTLDTVVEYDGRRIRYDTAYRYSFDSEKEFLDEVFKDFYDDQTEQLDAIYESLPAEITLCYNDDCRCWKTSEPYLEGYATVKCLLGCSDYKILYKELPKITDAMWNRLQLEASDS* |
⦗Top⦘ |