Basic Information | |
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Taxon OID | 3300009499 Open in IMG/M |
Scaffold ID | Ga0114930_10141339 Open in IMG/M |
Source Dataset Name | Deep subsurface microbial communities from Anholt, Denmark to uncover new lineages of life (NeLLi) - Anholt_01485 metaG |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1284 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (66.67%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface → Deep Subsurface Microbial Communities From Various Oceans To Uncover New Lineages Of Life (Nelli) |
Source Dataset Sampling Location | ||||||||
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Location Name | Denmark: Anholt | |||||||
Coordinates | Lat. (o) | 56.62 | Long. (o) | 11.67 | Alt. (m) | Depth (m) | 31 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F089742 | Metagenome | 108 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0114930_101413391 | F089742 | N/A | RGSMFLTPYVTINKGGMSFNRHVKEMIGDRFKYVAFYFDKEASKIGLWFWKDSCPGSYALIWLKNRETFSVNGKSFFRAYDIPEIIKKCNTRHFPLEMDEENKKNNDFYCIQLKSAKGKTAIKQ* |
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