Basic Information | |
---|---|
Taxon OID | 3300009602 Open in IMG/M |
Scaffold ID | Ga0114900_1065462 Open in IMG/M |
Source Dataset Name | Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 1068 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (66.67%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
---|---|
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium | (Source: UniRef50) |
Source Dataset Ecosystem |
---|
Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean → Deep Ocean Microbial Communities From The Global Malaspina Expedition |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | Mediterranean Sea | |||||||
Coordinates | Lat. (o) | 38.48 | Long. (o) | 10.16 | Alt. (m) | Depth (m) | 2304 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F060030 | Metagenome | 133 | N |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0114900_10654623 | F060030 | AGG | MVIQKLLVEEGIKRGLKESQKYSVSVLGYDFIGLVSRLAVFFVMAFLINSYFIATIQGGIWLNSLGSFFNMKFPSTLPQWLTQLFTTGYKGFTFWNLVTTISVLIVVVEAMQY |
⦗Top⦘ |