Basic Information | |
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Taxon OID | 3300009777 Open in IMG/M |
Scaffold ID | Ga0105164_10044409 Open in IMG/M |
Source Dataset Name | Wastewater microbial communities from Netherlands to study Microbial Dark Matter (Phase II) - VDW unchlorinated drinking water |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 2404 |
Total Scaffold Genes | 5 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (40.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira moscoviensis | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Freshwater → Drinking Water → Unchlorinated → Wastewater → Bacterial And Archaeal Communities From Various Locations To Study Microbial Dark Matter (Phase Ii) |
Source Dataset Sampling Location | ||||||||
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Location Name | Netherlands | |||||||
Coordinates | Lat. (o) | 52.2278 | Long. (o) | 5.919 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F054395 | Metagenome | 140 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0105164_100444095 | F054395 | N/A | VMVQATASVCFQRWTGLMVELCDQLVDLLIGPIIEQVGVGQLWEGRLHCGGVFDGTLFYTMAVIRRKVGESLLEGVDVEEGDGKRADATAGAAESAGNFTQQGGGCPLEPVVGFLIQRSRVGRSWT* |
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