Basic Information | |
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Taxon OID | 3300009960 Open in IMG/M |
Scaffold ID | Ga0133744_10021 Open in IMG/M |
Source Dataset Name | Human saliva viral communities from oral cavities of healthy adults from Alicante,Spain - individual 13 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Autonomous University of Barcelona |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 17645 |
Total Scaffold Genes | 27 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 24 (88.89%) |
Novel Protein Genes | 6 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 6 (100.00%) |
Associated Families | 6 |
Taxonomy | |
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All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes | (Source: UniRef50) |
Source Dataset Ecosystem |
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Host-Associated → Human → Digestive System → Oral Cavity → Saliva → Human Oral Cavity → Human Saliva Viral Communities From Oral Cavities Of Healthy Adults From Alicante,Spain |
Source Dataset Sampling Location | ||||||||
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Location Name | Alicante,Spain | |||||||
Coordinates | Lat. (o) | 38.3852246 | Long. (o) | -0.5132249 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F018385 | Metagenome | 235 | Y |
F027205 | Metagenome | 195 | N |
F036281 | Metagenome | 170 | N |
F043991 | Metagenome | 155 | N |
F051214 | Metagenome | 144 | N |
F074985 | Metagenome | 119 | N |
Protein ID | Family | RBS | Sequence |
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Ga0133744_1002110 | F036281 | AGGAG | MITLIKVDEGPVDIYELRMQYLAKLKQTDGVMLPTFIYRNKDLFVTEFKPTCDDQWIMYMTNAEGLITKMRIKNGDLMSNGSVLFLAEERKTYNAKEYYDYWSAREGRPAPFFYESRQYHVKSFMRVPGSTDLWITAERETGHWYTFRMSDAQKSKFTRHTMMNEKGHQSYDWVLENVEWAADTIRYF* |
Ga0133744_1002111 | F027205 | AGGA | VASRLIVSADDILKAVKESEEFERKALSEARKRDRAEGKEPRETLYPNPDLKPGREIVLDYIKNPERRRTPRCSVHLEKRTANNSYRFVVDVSQVRNRELADEIEKDLFAFMDYLLDEYDIPRRIKRSTK* |
Ga0133744_1002114 | F043991 | GAG | MSKKNPSVIDYFDLNGDLNEEAYEFEDVKLEEYIDKRSNVKPSWVGKYSHQMQFDLPDDTEVSFYKGLNIVYADINFAGGIRTILFKCRQKKNLTRFISRVLEIAQGDPSNVHPDFRA* |
Ga0133744_1002115 | F051214 | AGGAG | MPGKIVAHDTHLRIDTEFIELKDCFEAFRRGVEYREKNDVDDILVICNAPDIIEYQLKNGDSFIVTYDPIHRIIVMRVFLHDEDITIKPIYIYNNREYQIACEFLRQIMHDKIDLKGEWIA* |
Ga0133744_1002119 | F018385 | GGAG | MAEYVNQWESYKELSIENDRNPVLDDPVIYGNDVKHFTLTVYSPEGRVSKYWNTRILADDLGRCRIACPRDGKILCFAWFEWTSYMFSHDGLNELVFMPRTNSRLPSTLWNTKEVK* |
Ga0133744_100219 | F074985 | AGGAGG | MELTDGGWYKTPRIIKGTDFLAHIHDTYASGNAMYVEFKASEGEVRILEYKRLYEVDTESAVLFTINTYPQESILLKNIEEYEFIQYRPKQAWKAIHMGSTKRFNLEQFDQLWLDQTFQKLHPVIVNHDGKFWHVMGLKLDVDTDGSFWGLYLKRQDSDFMKEIRMPLTQKFIYNPISGSWSLDDSTQEIKDLEEIKQTLRADTILDVTVSGVPMKLIRVQEIAKGVLFFVFQDEEKNKRYYYNRPAAKLRIVTDSETGEQKYLLDHIKAMHID* |
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