Basic Information | |
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Taxon OID | 3300010031 Open in IMG/M |
Scaffold ID | Ga0126337_10060612 Open in IMG/M |
Source Dataset Name | Coral microbial communities from La Bocana,Puerto Morelos, Mexico - Diploria C A metagenome |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 2578 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (33.33%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified → Coral → Coral Microbial Communities From Various Locations To Study Host-Microbial Communication |
Source Dataset Sampling Location | ||||||||
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Location Name | La Bocana,Puerto Morelos, Mexico | |||||||
Coordinates | Lat. (o) | 20.8777 | Long. (o) | -86.843 | Alt. (m) | Depth (m) | 4 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F001193 | Metagenome / Metatranscriptome | 751 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0126337_100606122 | F001193 | AGG | MAIALTLRAFNDLGRSVTPIFLSMGRFLCRFSMFCEKMKKIYRVEF* |
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