NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Scaffold Ga0136270_1003291

Scaffold Ga0136270_1003291


Overview

Basic Information
Taxon OID3300010223 Open in IMG/M
Scaffold IDGa0136270_1003291 Open in IMG/M
Source Dataset NameFreshwater aquifer microbial community from Bangor, North Wales, UK, before enrichment, replicate 3
Source Dataset CategoryMetagenome
Source Dataset Use PolicyOpen
Sequencing CenterFidelity Systems Inc
Sequencing StatusPermanent Draft

Scaffold Components
Scaffold Length (bps)2608
Total Scaffold Genes4 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)1 (25.00%)
Novel Protein Genes1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)0 (0.00%)
Associated Families1

Taxonomy
All Organisms → cellular organisms → Bacteria(Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem
Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater → Freshwater Microbial Communities Enriched With Nitrile Substrates

Source Dataset Sampling Location
Location NameBangor, North Wales, UK
CoordinatesLat. (o)53.23Long. (o)-4.13Alt. (m)Depth (m)
Location on Map
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Associated Families

Sequences


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