Basic Information | |
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Taxon OID | 3300010932 Open in IMG/M |
Scaffold ID | Ga0137843_1106977 Open in IMG/M |
Source Dataset Name | Freshwater microbial communities from the Kallisti Limnes subsea pool, Santorini, Greece - 2-BIOTECH-ROV7-P1 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Hellenic Centre for Marine Research (HCMR) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1408 |
Total Scaffold Genes | 4 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (50.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Subsea Pool → Kallisti Limnes Metagenome Study |
Source Dataset Sampling Location | ||||||||
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Location Name | Santorini, Greece | |||||||
Coordinates | Lat. (o) | 36.45421 | Long. (o) | 25.40539 | Alt. (m) | Depth (m) | 229 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F030780 | Metagenome | 184 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0137843_11069771 | F030780 | N/A | WXYXFXXQAXLHFGQAYQVAQKIERGTMTDKVKQIIWVFDVETNRKKRIQLQTFLDRANHSFRHENIKYFALEKDRDSFAKECRE* |
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