Basic Information | |
---|---|
Taxon OID | 3300010969 Open in IMG/M |
Scaffold ID | Ga0139246_1068927 Open in IMG/M |
Source Dataset Name | Microbial communities from the outside layer of the microbial mat covering an inactive hydrothermal chimney from the Kolumbo submarine volcano, Santorini, Greece - V16_c.out |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Hellenic Centre for Marine Research (HCMR) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 930 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
---|---|
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → Sphingobium fuliginis | (Source: UniRef50) |
Source Dataset Ecosystem |
---|
Environmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats → Hydrothermal Chimney Microbial Mat → Inactive Hydrothermal Chimney Metagenome Study |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | Kolumbo submarine Volcano, Hellenic Volcanic Arc, Aegean Sea, Greece | |||||||
Coordinates | Lat. (o) | 36.52 | Long. (o) | 25.48 | Alt. (m) | Depth (m) | 503 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F040633 | Metagenome / Metatranscriptome | 161 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0139246_10689272 | F040633 | GAG | MSVIGVRRAKAAFPSGCKSHPAILLQPEAIGAVMEVTK |
⦗Top⦘ |