Basic Information | |
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Taxon OID | 3300010997 Open in IMG/M |
Scaffold ID | Ga0139324_1084922 Open in IMG/M |
Source Dataset Name | ECM15MPS05_Aassembled -- Sediment microbial communities from coastal marsh in Port Sulphur, LA sequencing method A (2X250bp) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Molecular Research LP (MR DNA) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 763 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (66.67%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment → Cwc Coastal Marshes |
Source Dataset Sampling Location | ||||||||
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Location Name | Louisiana, Port Sulphur, Bay Sansbois east | |||||||
Coordinates | Lat. (o) | 29.45083 | Long. (o) | -89.75005 | Alt. (m) | Depth (m) | 0 to .02 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F042645 | Metagenome / Metatranscriptome | 158 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0139324_10849222 | F042645 | GGAG | MARITDLDIMEIRNLFEEALVRAQQADKRQKMRLRKKIRDEVFLLLTWEKPTPSSIMNRWEERLQDVFGVMPFGFKEDLFKMLVDKMQHPLRRRLGNQEC* |
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