Scaffold Ga0151515

Basic Information
Taxon OID	3300011114 Open in IMG/M
Scaffold ID	Ga0151515_10154 Open in IMG/M
Source Dataset Name	Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2016Feb
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Chunlab, Inc
Sequencing Status	Finished

Basic Information

Taxon OID

3300011114 Open in IMG/M

Scaffold ID

Ga0151515_10154 Open in IMG/M

Source Dataset Name

Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2016Feb

Source Dataset Category

Metagenome

Source Dataset Use Policy

Open

Sequencing Center

Chunlab, Inc

Sequencing Status

Finished

Scaffold Components
Scaffold Length (bps)	32267
Total Scaffold Genes	46 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	31 (67.39%)
Novel Protein Genes	9 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	6 (66.67%)
Associated Families	9

Scaffold Components

Scaffold Length (bps)

32267

Total Scaffold Genes

46 (view)

Total Scaffold Genes with Ribosome Binding Sites (RBS)

31 (67.39%)

Novel Protein Genes

9 (view)

Novel Protein Genes with Ribosome Binding Sites (RBS)

6 (66.67%)

Associated Families

Taxonomy
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	(Source: UniRef50)

Taxonomy

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage

(Source: UniRef50)

Source Dataset Ecosystem
Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Freshwater Viral Communities From Lake Soyang, Gangwon-Do, South Korea

Source Dataset Ecosystem

Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Freshwater Viral Communities From Lake Soyang, Gangwon-Do, South Korea

Source Dataset Sampling Location
Location Name	Gangwon-do, South Korea
Coordinates	Lat. (^o)	37.947421	Long. (^o)	127.818872	Alt. (m)	Depth (m)	0
Location on Map

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Source Dataset Sampling Location

Location Name

Gangwon-do, South Korea

Coordinates

Lat. (^o)

37.947421

Long. (^o)

127.818872

Alt. (m)

Depth (m)

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F002260	Metagenome / Metatranscriptome	577	Y
F003807	Metagenome	467	Y
F011761	Metagenome / Metatranscriptome	287	Y
F020635	Metagenome	223	Y
F026558	Metagenome	197	Y
F040626	Metagenome	161	Y
F042895	Metagenome	157	Y
F058142	Metagenome / Metatranscriptome	135	Y
F058146	Metagenome	135	Y

Family

Sequences

Protein ID	Family	RBS	Sequence
Ga0151515_1015413	F040626	N/A	MALILTIDGLGKRYGMLPSEVLERSNTFDLYIMDAAMTFESYHHKKAMNNGREPMPDYTTDELQNIMNKAKGE*
Ga0151515_1015414	F058146	AGGAG	MRLSQLTAKPQLILIELVDEDIIKEFGEAITFHTWDRQPMDVFMKLAGASNKDTSEIISVVRTLILDENGKEILKDDAMLPTNVLMKAIGKVTEILGK*
Ga0151515_1015416	F003807	N/A	MDQSYLKTDEEKLRSLLIDEAKASPMLDNMQATIRQMKAKQAFRIALLNQLIDNLNEKV*
Ga0151515_1015418	F058142	GGAG	MAQAISYTVLNQPYTTQDQIIAVLRRDILNTWNIPVFEDFPSASEKVRYGVYVSDVHQDDRNPHQLGVQYGGSIYHAYDTFSVTYISFQEDPYNQPVNAIIANLVTALKDDGEQLFDGYFERDFTQVRTYGPTQAERHDWTFKVLRLEFNT*
Ga0151515_1015419	F002260	AGGA	MSVPYQRISNATVRDIQFYDPAAERRASALNVDWEPYFKVGSQEWLYKLEFGWWQKYCDTVLGAYYYANLPNGQLISSFNPSLLIKNDQTLIRLDTFGAIQVFYESLVTDVSNMNEVDMQNYDFAVRRCENEWTKALQLMNFYDLYQDSPNGPTTKLEENWTADVDFFNGDRRYF*
Ga0151515_1015420	F011761	AGGA	MAYVLGGPNNEGDGFTTAISNFALRAMHESNGLVNFTNVVTPTQGQTFLVPNFAPITYQDYNANGTGGTYGTGNAVVQNPSLGQGTITATPAVAQTAFDIFYGWTTSFTLAATLGAELGESFAEKVDQRVTEAFLAFKVDPANTYYATSADGFDRVLQLGAMELLPTGTSPSSPTAGFTTNQVLELVRLIKQNFKVARMPGTPVIVLDSNGDDGVTGSSLTRLLGELTGGAVSQSGGSNLSALGNELLMSGKIESVYGCMVMFTTFLQSSSRTIDGNASTACIVGAYFGDSALFTVMKEGLAIKTGEVPGGLQIWLTGVGYFGAGVGDLRRGGAINIQQ*
Ga0151515_1015422	F026558	AGGA	MTIKADLLKRNAIYDGIYNQMLSYQFAYLGGMPFKMLVRKKRPSEDSTLYNDLVTNTIAQPICRYIVDTINDVLFEPGIKRNVQFCTTTGQMIDPKNSEWSDLFLLDADLTNRTLTSFMESVGDLTSIYGHCWVAVDMPQQSEGNLGRPYVCAINPLDVWDWEFDYYGGRPMLKYVKVKEMEDEDCYYIKCYHLGDATTPSYWKSFEVKKGPSQMNEPAELIGEGYYPPGMSIPLFIAYGRRDPRTIDLGISDIDSAVDAQREHYKMECEKYTALQFAHTIIRADKGVSVPVHAGAIVRANEGQIEAIVVDTGDVDAIIKSQQDILEQIEALTGLGGLRTSKNQIASGVAIIEERKQLHRTAKSKARLMEVTEEMIFTFAARFMEMRWAGEVNYNTDYEAHDTNYRMAVMRSAKELVGDNPMIQSLITNEIIGMLAPATEIPEYQQAYIKTVQDPDLRTLMMDTDQAVMSRDLTPSMIPEHEMYGEEDDETGKEQAEYDNSIGEADNTSLLGGAGTPITNIGMTYYTAQVAPVILNTMNTGR*
Ga0151515_1015431	F042895	AGGA	MAEFKGLIDKPFYVGHIKNMDRMTTELSKYMTEYEIDQCISFMHTLNDTKYDINPSPDDCKTQLQIMFGRDRFLELTKQWQAENQKFLSVFGTLKFKEKATGQYFDGLDPEDLPENYTKVYI*
Ga0151515_1015445	F020635	N/A	MEFSLKQLSWIVITALGFGGTGYLSMNGKIDELTTKVAVVHNQMEQSTKQLDRIEDKLNTAKVK*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Scaffold Ga0151515_10154

Overview

Ecosystem & Geography

Associated Families

Sequences