Scaffold Ga0151515

Basic Information
Taxon OID	3300011114 Open in IMG/M
Scaffold ID	Ga0151515_10484 Open in IMG/M
Source Dataset Name	Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2016Feb
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Chunlab, Inc
Sequencing Status	Finished

Basic Information

Taxon OID

3300011114 Open in IMG/M

Scaffold ID

Ga0151515_10484 Open in IMG/M

Source Dataset Name

Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2016Feb

Source Dataset Category

Metagenome

Source Dataset Use Policy

Open

Sequencing Center

Chunlab, Inc

Sequencing Status

Finished

Scaffold Components
Scaffold Length (bps)	17340
Total Scaffold Genes	31 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	24 (77.42%)
Novel Protein Genes	7 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	5 (71.43%)
Associated Families	5

Scaffold Components

Scaffold Length (bps)

17340

Total Scaffold Genes

31 (view)

Total Scaffold Genes with Ribosome Binding Sites (RBS)

24 (77.42%)

Novel Protein Genes

7 (view)

Novel Protein Genes with Ribosome Binding Sites (RBS)

5 (71.43%)

Associated Families

Taxonomy
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	(Source: UniRef50)

Taxonomy

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage

(Source: UniRef50)

Source Dataset Ecosystem
Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Freshwater Viral Communities From Lake Soyang, Gangwon-Do, South Korea

Source Dataset Ecosystem

Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Freshwater Viral Communities From Lake Soyang, Gangwon-Do, South Korea

Source Dataset Sampling Location
Location Name	Gangwon-do, South Korea
Coordinates	Lat. (^o)	37.947421	Long. (^o)	127.818872	Alt. (m)	Depth (m)	0
Location on Map

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Source Dataset Sampling Location

Location Name

Gangwon-do, South Korea

Coordinates

Lat. (^o)

37.947421

Long. (^o)

127.818872

Alt. (m)

Depth (m)

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F002433	Metagenome / Metatranscriptome	559	Y
F007466	Metagenome	350	Y
F011152	Metagenome	294	Y
F016529	Metagenome	246	Y
F029109	Metagenome	189	Y

Family

Sequences

Protein ID	Family	RBS	Sequence
Ga0151515_1048413	F007466	AGG	MTQWAPVWRVKIDGTDVTDSVIANLSITSGRTNIYTQAQAGYCSITLIIFGQAALPYEINDTISIEVQDTSAVYVPIFGGSVVDISVSVSQVGSSAYTQEVTITALGALARLQKALTDGVLTQDFEGNQIETILREVLFAQWQQVSAALQWNTYDPTVQWQDAENTGLGEIDTPGNYELAQRASNRAVVYDLVAALATSGLGYLYEDAQGLISYGDSTHRTNYLATYGYTDLTANQALGQGITIKTRAGDVRNDLTIKYGTLSANEVSDTDEASIGLYGNLAQIITTTIKHSADATSQAAFYLALRAYPQPIFDSITYALTNPELDNADRDALINIFMGQPIALNDLPPNMSSGVFQGFAEGWTFKASYNQLAITLLMSPLAYSLQAMRWNDVPIVEQWNTVSPTLEWQYATIVS*
Ga0151515_1048415	F029109	GGAG	MAYKATKGQGTFRIEVEPYALNNLISTLNMLDKETQGRVRDAAQPLSKRLAGQIMMFGHSSPTPVTALVLQSITTPRDRLIRVDVGGAKKVGRKYGQRASKSGKGNKVGGTGAPAGSLLWGSEYGSHAGVDSIGRSYTNRFGAPPRASGYWLNPAVEFYTPIVAQEYISIVQGIINDLGLK*
Ga0151515_104842	F011152	AGG	MIKMHMSAADEWAIHERASHVVFATEGNLGTIQYYNKLNNYERVVEYAESIAAELCVARYFGLDFDISASQGKRNADVGKGIEVKWTAYVGGNLIVSPADRDNDVAVLVVGKSPEYFIAGWLPVSFAKRKRFKNPRQDTWWVDQSNLNPIENLTRSEYAATAI*
Ga0151515_1048425	F016529	GGAG	MRLLQFDCSICAKLYGDGRKMHGLTKGAELTLNEWFTQCSGCGAFGIKIIDDEMVAGLE*
Ga0151515_1048426	F011152	AGGA	MIKMHMSAADEWAIFNEAAKVIFEWDESRPQTPRYNMGLNNYEQVIQHAESMAAELCVARYFGLDYDLNDNKGKIRADVGKAIEVKWTAYVGGNLIIAPSDRDNDVAVLVVGKSPEYFIVGWLPVIFAKRKRFKNPRQDTWWVDQANLNPIENLSRSEYAATAI*
Ga0151515_1048430	F002433	N/A	VSVGEWTAVGALVLAVLAAIYSSMRVIVRSIMSELSPNGGSSMKDQVSRIEARLDQLILELALKK*
Ga0151515_104847	F002433	N/A	VSVGEWTAVGGLVIAVLTAIYSSMRFMVKSIMRELQPNGGNSLKDQVSRIEARLDTLILKMALKK*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Scaffold Ga0151515_10484

Overview

Ecosystem & Geography

Associated Families

Sequences