Scaffold Ga0151515

Basic Information
Taxon OID	3300011114 Open in IMG/M
Scaffold ID	Ga0151515_10641 Open in IMG/M
Source Dataset Name	Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2016Feb
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Chunlab, Inc
Sequencing Status	Finished

Basic Information

Taxon OID

3300011114 Open in IMG/M

Scaffold ID

Ga0151515_10641 Open in IMG/M

Source Dataset Name

Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2016Feb

Source Dataset Category

Metagenome

Source Dataset Use Policy

Open

Sequencing Center

Chunlab, Inc

Sequencing Status

Finished

Scaffold Components
Scaffold Length (bps)	14743
Total Scaffold Genes	22 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	15 (68.18%)
Novel Protein Genes	8 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	6 (75.00%)
Associated Families	8

Scaffold Components

Scaffold Length (bps)

14743

Total Scaffold Genes

22 (view)

Total Scaffold Genes with Ribosome Binding Sites (RBS)

15 (68.18%)

Novel Protein Genes

8 (view)

Novel Protein Genes with Ribosome Binding Sites (RBS)

6 (75.00%)

Associated Families

Taxonomy
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	(Source: UniRef50)

Taxonomy

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes

(Source: UniRef50)

Source Dataset Ecosystem
Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Freshwater Viral Communities From Lake Soyang, Gangwon-Do, South Korea

Source Dataset Ecosystem

Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Freshwater Viral Communities From Lake Soyang, Gangwon-Do, South Korea

Source Dataset Sampling Location
Location Name	Gangwon-do, South Korea
Coordinates	Lat. (^o)	37.947421	Long. (^o)	127.818872	Alt. (m)	Depth (m)	0
Location on Map

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Source Dataset Sampling Location

Location Name

Gangwon-do, South Korea

Coordinates

Lat. (^o)

37.947421

Long. (^o)

127.818872

Alt. (m)

Depth (m)

Location on Map

Zoom:

Associated Families

Family	Category	Number of Sequences	3D Structure?
F001805	Metagenome / Metatranscriptome	631	Y
F008616	Metagenome / Metatranscriptome	330	Y
F008811	Metagenome / Metatranscriptome	327	N
F011755	Metagenome	287	Y
F013987	Metagenome	266	Y
F023328	Metagenome	210	N
F030061	Metagenome	186	N
F058943	Metagenome / Metatranscriptome	134	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0151515_1064110	F001805	GGA	MIKKNEAIFIGIDDQVIELTGADKEAFIAQREADNAEAALLETEYKAKQKAREDAIKKFAEVAGLTEAELNAIL*
Ga0151515_1064112	F023328	N/A	MTVYTPTYRVTIAGVVQTSTVLQDGTITYGRNDFFEATQPSYCNIELLNLDGTSPVVELLDTVLIEVTDSTGAYVKLFTGEVSGIYNRFEGAGLGGKPNTLQIQAIGALGLLVKRYAGAVAYPEELDGARIQRILEETLFVAWEDLSNTLTWNDFTTETWDNYGVQGIDTIDAGRYEVLARSAEVQQAYELTDITQQSGLGYLYDTPEFEIGYADAERRSANYATNLIELDANLVNADIQTRLQTADIVNSVVIRYDDPILEVAAQNDTSINNYGLLEEIRSTILAQTVDATEQATNFVNYRGTPRTSLEAVSVNLAHSDMTNTVRDNLLGVSMDSLLYLDNIPVGLIPEGYFEGFIEGWTFTLGRKNLELTMSVSNSIYSTLDVQWEDYNALLQWQNLDSTTTWLDVI*
Ga0151515_1064115	F008616	AGG	MLKLKLTWELETGEKFEEWTRPIELSLAEKELYSGKSIVKILIEESTPSNTLLLFLAHKIQQRVTKKVENFETWKSKVTDIAASDFETANFTKPEVSGEQQ*
Ga0151515_1064116	F008811	AGG	MATTILSGRSLTLTIATKNYSEQILDSAINFDTERLTFDTLAGKAYKYIDSNVTLDINFLNDAGKSPDSLYKALWDATESAPDTALAFVLTLTTGVTLTGTVLPQYPPVSASGADAQTCSVSLQVVGIPTEDLTA*
Ga0151515_1064117	F030061	AGTAGG	MALSTLRAGLKTAITSNTNYSAYDHVPEIIIPPAALILASDPYLEPVVIGNNKNWYVRLTLEVVSTTYSNPSALTNLEDDIETILGLIPTSWIILSVSSPRIRSTNSTDLLSAEIQLQTAYTG*
Ga0151515_1064118	F058943	GAGG	MPVLVTAAQLRAVLGVPNTLYDDTALNAIINTAEDAIGDFLIQWKVGIDKHYSATATETTIHTTRPHKFYDGQTVALSGVEAHVNGNKTISEIVDPYTFRITTTGAPIHTEYYNVIPNGIAAENDLSQYDGVAAIEEAVLQIAIDVFQSRLAAGGTQQALDFTPAPYRMGRTLLYKITGLISKYIDSNSQVG*
Ga0151515_106412	F011755	N/A	VNRKNGKQMSDVIYLHYHYDYDNGIQSTCRDAKCYQKRLEDRKKLEEYQFQVDCDLARKENLRIVEDMIQDPRIDNYNDY*
Ga0151515_1064122	F013987	AGGAG	MIKEEKHRILPALDRAHEEALRQGIITTLDAAGMAMAYTLAGVLDGGTLKPVEEVKYMGQLQQILDKYGLSLYGRKEKPELETGEDPIDNLRKLNPENSDHTTSSPN*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Scaffold Ga0151515_10641

Overview

Ecosystem & Geography

Associated Families

Sequences