Scaffold Ga0151516

Basic Information
Taxon OID	3300011116 Open in IMG/M
Scaffold ID	Ga0151516_10126 Open in IMG/M
Source Dataset Name	Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2015Nov
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Chunlab, Inc
Sequencing Status	Finished

Basic Information

Taxon OID

3300011116 Open in IMG/M

Scaffold ID

Ga0151516_10126 Open in IMG/M

Source Dataset Name

Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2015Nov

Source Dataset Category

Metagenome

Source Dataset Use Policy

Open

Sequencing Center

Chunlab, Inc

Sequencing Status

Finished

Scaffold Components
Scaffold Length (bps)	40890
Total Scaffold Genes	65 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	10 (15.38%)
Novel Protein Genes	8 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (12.50%)
Associated Families	8

Scaffold Components

Scaffold Length (bps)

40890

Total Scaffold Genes

65 (view)

Total Scaffold Genes with Ribosome Binding Sites (RBS)

10 (15.38%)

Novel Protein Genes

8 (view)

Novel Protein Genes with Ribosome Binding Sites (RBS)

1 (12.50%)

Associated Families

Taxonomy
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	(Source: UniRef50)

Taxonomy

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage

(Source: UniRef50)

Source Dataset Ecosystem
Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Freshwater Viral Communities From Lake Soyang, Gangwon-Do, South Korea

Source Dataset Ecosystem

Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Freshwater Viral Communities From Lake Soyang, Gangwon-Do, South Korea

Source Dataset Sampling Location
Location Name	Gangwon-do, South Korea
Coordinates	Lat. (^o)	37.947421	Long. (^o)	127.818872	Alt. (m)	Depth (m)	0
Location on Map

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Source Dataset Sampling Location

Location Name

Gangwon-do, South Korea

Coordinates

Lat. (^o)

37.947421

Long. (^o)

127.818872

Alt. (m)

Depth (m)

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F004839	Metagenome / Metatranscriptome	421	N
F014956	Metagenome / Metatranscriptome	258	Y
F015997	Metagenome / Metatranscriptome	250	N
F018511	Metagenome / Metatranscriptome	234	N
F021732	Metagenome / Metatranscriptome	217	Y
F025505	Metagenome / Metatranscriptome	201	N
F051874	Metagenome / Metatranscriptome	143	Y
F060725	Metagenome	132	N

Family

Sequences

Protein ID	Family	RBS	Sequence
Ga0151516_1012625	F060725	N/A	MIKLFINNQEVDLNQKDVNVTIDYSIENIELGNISGAHSKRNVTLPGTKTNIDIFENIETPNVIVTNAYKLLPARLEANGVPILTGKARLDSGELNAMNHGFKANNYKVALIGNNADWFADVGNILVRSLGWQDITVSTATVKTNYNPLTSEHCFILMKWKAWENETYIVDNELTPAIFIWQILEKAFQNKGYQLNSIFKTDPFSRLIIPMGLNLDADYIKDFVNLRASNPSPSSFVYSSGDYGTIDIAFTNETTSPNFDTGGNYSGGVYTVPINALYELIAELNVTLTASIGDLNQFAELILFFEVNGNNVSTYDLTNETSLNDSIALEFLGDLVAGDTVKMRLRYENVTFNLVIGGSFSVVAQKEGLEQGETVNLEYIIPNSWYVKDIIADLTTIFNLAWETDVLSKQVYAYPKDNYTVRYRANASGAITLTTFEGFFKDTNKYDLNTRDIDGSELTILDNYKSSQVLAYATDDDTTNKEEARRGVNIYSGGYNFPEDRFPNGIEFLYTKFFAKAIHINDVAITTGGIYGAQMPLVFGDDYNTVPDAEPNYNLAPRLLYYAGRRSGLDGYVRLYDEASSAASAFDFPAAFMVNYNDPSGGDFNLSFSDEVTNYSNVMQGVFKTFHLQTYKRIELGKQYTTFVKWENKDITQLSFRRKGMIGSSNFIIQELEYNPKSNSPARTVILYDEKPNVNDLSKVSNTITLAGAPPQGGTVTGSGSGLVGANGATVNIQLSYTPFLNSMTNVLILPVNSGITQVSNTNANVLVFQNGQKLIPTIQYIIGGSTIGINIDTHYDGANYEVIVNGVTKG*
Ga0151516_1012627	F018511	N/A	MKIGNIWGELGSRIPEEYKAQVIATVNRTYRVLSIDPADMDYLFNVYNNFVNHYEPERRNCPACRTKVVGKMRQIVQYWNENG*
Ga0151516_1012635	F015997	N/A	MSQLIQPSEVISGGVARPTPADIRLDKSLISPHIQDAEFQWIVPAIGVSFYDTLVAAKGSSTAFTSTAYQALWNDHLKSFCANAVLYEAAPYMVMQLGTNGLYTLDNEYGQNVGVDGLKFYQDTMLQRLGVKKKRIKDYLCTCASNLLGFIPSAIGCPEATCNEDDEIFDIYNTMGIVL*
Ga0151516_1012646	F004839	N/A	MEKNFNNLQFKWTFESISDNIPTIMLLTIVLTYGINAYLTAIFLPIDFWLAIIAASILQLGRFAVVFMDFLNPTKGRSTYPPKIALGATLVALVEIFFGLQEQYEGGEFITMFLFVGTIIVFGYLLEINFVDKGVEAYGINAPEPKPKRKRKPRVKVEVKENNETTGTTAKNFVSSFKTITL*
Ga0151516_1012647	F051874	N/A	MTTLELIEQKMEVALQAINAILPEGYFVGQALSSTDFGNSGYLIIKKECPVEYLINVCKVRISDHSATNSVRQATEIMVDLVRFNLDDLISRVERAVYPERFEQVEIRTLTGDVLTSNFQVGRKPFNTLTEPTFLGEVIGKKGNLLHSYSWMKEDVRYEWRRK*
Ga0151516_1012661	F014956	GGA	MINIQDFALNACISICPNHIVEPKHLQKWWREKGVGEIEKYFWTGKKISYDQEIDWKAISDHKKQMWYDSQNFQIQAGNEYSKRQG*
Ga0151516_1012663	F021732	N/A	MNITKYTCKCTLDKKLGHFVHVIFSYGFGLYGQTSPHSPEDNMEIHGWTFEPETIDLELYPKINRYNLMPLVEENEMDWVIINN*
Ga0151516_1012664	F025505	N/A	MNNLPMIAYRVEEKIQDVQLVIQNRELRIFKTGTKEAIPKIAQTLSQLLPVYGIEPKPEHLMEVTEFISNYKLLAVDEIKLAFEKFAKQELDINDHKLYGKVDLHAIGRIITAYITWRQKIYFAMDSDLQAKKEEEDRIKRLGKVAEEYDKDFDNKLKNFQKPLEEIPVFWYDECVKRGYINEWGEGEKEALWAEAQEMAKNEKPDSDNLIDRKNHMRKIEEGNMPRARALAYKLAVWRKVLLR*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Scaffold Ga0151516_10126

Overview

Ecosystem & Geography

Associated Families

Sequences