Scaffold Ga0151516

Basic Information
Taxon OID	3300011116 Open in IMG/M
Scaffold ID	Ga0151516_10430 Open in IMG/M
Source Dataset Name	Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2015Nov
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Chunlab, Inc
Sequencing Status	Finished

Basic Information

Taxon OID

3300011116 Open in IMG/M

Scaffold ID

Ga0151516_10430 Open in IMG/M

Source Dataset Name

Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2015Nov

Source Dataset Category

Metagenome

Source Dataset Use Policy

Open

Sequencing Center

Chunlab, Inc

Sequencing Status

Finished

Scaffold Components
Scaffold Length (bps)	20707
Total Scaffold Genes	23 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	20 (86.96%)
Novel Protein Genes	3 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	3 (100.00%)
Associated Families	3

Scaffold Components

Scaffold Length (bps)

20707

Total Scaffold Genes

23 (view)

Total Scaffold Genes with Ribosome Binding Sites (RBS)

20 (86.96%)

Novel Protein Genes

3 (view)

Novel Protein Genes with Ribosome Binding Sites (RBS)

3 (100.00%)

Associated Families

Taxonomy
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	(Source: UniRef50)

Taxonomy

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage

(Source: UniRef50)

Source Dataset Ecosystem
Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Freshwater Viral Communities From Lake Soyang, Gangwon-Do, South Korea

Source Dataset Ecosystem

Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Freshwater Viral Communities From Lake Soyang, Gangwon-Do, South Korea

Source Dataset Sampling Location
Location Name	Gangwon-do, South Korea
Coordinates	Lat. (^o)	37.947421	Long. (^o)	127.818872	Alt. (m)	Depth (m)	0
Location on Map

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Source Dataset Sampling Location

Location Name

Gangwon-do, South Korea

Coordinates

Lat. (^o)

37.947421

Long. (^o)

127.818872

Alt. (m)

Depth (m)

Location on Map

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Family	Category	Number of Sequences	3D Structure?
F001299	Metagenome / Metatranscriptome	727	Y
F030356	Metagenome	185	Y
F041596	Metagenome / Metatranscriptome	159	Y

Family

Sequences

Protein ID	Family	RBS	Sequence
Ga0151516_1043010	F030356	GAGG	MLDIKNIPIDKINQNRRLNANLVRMKNQMDVKMASYLRYLGTKNAVNRASDYHYLVLAVTDSTAPVNGIDYIHPSVKPAVDYATAVITKGLVPNGEINFEFVPDSEEDEYAARQATEMVSKVVNQMNDPHFIMERWVMDSAMHKNGMMMIKPVREPIVRYVTTEGTADQLTAFEQQAADSGLVAMRQSRRRVSVDLQTALAEIQQNLGSERAAISEEQLDQFVNNLPQDPEEQDEPMDQPGAMLDAEQSVLDDAIARNTIYSAKYKLTGYNINIKFHPIAQHYWICDPTVPEMREQPFCGYYDPMTIQEATELYPGIDLAEFEVHAEYNMNGAYQAGSVLNNLAIHARDSVPVMGIPVSSAASADPDSRQVSIVTVWNKYDIDGDGELELVELIYSGSYIISAREVEFIPVANMCPKPLPGNFYGMSIAESVIPMQEYATSAARAEIQLGLLTATPRLGVKPDKLDFEMLQDGEAAIFILDSKFNPATDVYAVPPPSGNLQFLEVAMNRIQQDTMAMIGMTTPQDVFNPEVMSPGNSGVKLQMALTPNQIIQDNTVRNCAEGLREALWLTWRTLIQYGDDYGVKKLAASSHPDKQPIFLDYQAWDDMNFCDRKQVHIELALGMMSEENALARTQIIQKVQTELYNTVQGMVSSGTLTPDIFKKVKKPFADTLYQLGVKDCDTYLPSDDEVKQMIAQAQEAAKTREPSAEDKQKLSVANLNDVKARQIEMEVAGTDAESQLDFMSMAAGDPKVYS*
Ga0151516_1043015	F041596	AGGA	MNKRPVTNDNNVWDDATDTVTEPAKPSKPKKPEPVIESREFDLEGLMTDFPTAKDLERFVYDETGIVLNLKGRANKLKYQIAMDTLNGVAVEARYIGKDNPYLEKTDMVPEEPMKELPPRDPGLPPRTELQNEFFTAFVPHSDQEYHAQGRKMHCTFKKYKNGMITYEVIGPIEPRPYGEKIDKWGKVRPEIIRWVDPRTGEQIVQRPDGSFTPIGRRLKAMMQTMRYNDSNQWVRYIDRDFISLDHKAAINPWDLDE*
Ga0151516_104306	F001299	AGGAG	MSDDLNKPEYLSDADPEKNFDYWRQDHGGMVTNHNGIADTLLKNDKLYNAMKGDWQRTSLSGSQNIITTTGREDGKFYIRREQKNAEAVARRCQAYRKAVEAGHNDPLAPIGDDGKLTYKWMDLPNVVSIRISDQYFGGMPWAAIKHDRNLKAQFYKVVEKEYNQYVCYPGGKLPIPVDVPYPTKVGQQRFFKGH*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Scaffold Ga0151516_10430

Overview

Ecosystem & Geography

Associated Families

Sequences