Basic Information | |
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Taxon OID | 3300011118 Open in IMG/M |
Scaffold ID | Ga0114922_10184434 Open in IMG/M |
Source Dataset Name | Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaG |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1764 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales → Veillonellaceae → unclassified Veillonellaceae → Veillonellaceae bacterium | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface → Deep Subsurface Microbial Communities From Various Oceans To Uncover New Lineages Of Life (Nelli) |
Source Dataset Sampling Location | ||||||||
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Location Name | Aarhus Bay | |||||||
Coordinates | Lat. (o) | 56.103 | Long. (o) | 10.458 | Alt. (m) | Depth (m) | 27 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F092306 | Metagenome / Metatranscriptome | 107 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0114922_101844342 | F092306 | AGGAGG | MTATFYGEVNYQQSSEPHTIVDVQESDCWPVDDRSGSTTKDQLDDGLHPVVAIGGRTAADGRPFNLTGVVISINMSVLGTATDRVEVNIADGTIVRNYVANVLTYSGGNPNTFETAPIVGQPVYVDDSDDLAEGVTLSLSEQNDGDLRNPLAGYLWYCQDEIADGQVGGARATSTFDVTLAEELVEQTYCVLLVNAARELAAG* |
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