Basic Information | |
---|---|
Taxon OID | 3300011250 Open in IMG/M |
Scaffold ID | Ga0151666_1038324 Open in IMG/M |
Source Dataset Name | Marine sediment microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_5, 0.2 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Toyama Prefectural University |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 558 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp. | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Coastal → Unclassified → Marine → Environmental Dna From Seawater And Marine Sediment |
Source Dataset Sampling Location | ||||||||
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Location Name | Japan Sea near Toyama Prefecture, JAPAN | |||||||
Coordinates | Lat. (o) | 37.31041 | Long. (o) | 137.23108 | Alt. (m) | Depth (m) | 11 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F062711 | Metagenome | 130 | N |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0151666_10383241 | F062711 | N/A | KVKAQAPSHKLRQIVAGQFGKLTKPQATSNKLRQSVQCFVPGRRVKNRFRRNI* |
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