Basic Information | |
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Taxon OID | 3300011258 Open in IMG/M |
Scaffold ID | Ga0151677_1002053 Open in IMG/M |
Source Dataset Name | Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_1, permeate |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Toyama Prefectural University |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1575 |
Total Scaffold Genes | 8 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 6 (75.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Coastal → Unclassified → Marine → Environmental Dna From Seawater And Marine Sediment |
Source Dataset Sampling Location | ||||||||
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Location Name | Japan Sea near Toyama Prefecture, JAPAN | |||||||
Coordinates | Lat. (o) | 36.97018 | Long. (o) | 137.37008 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F022107 | Metagenome / Metatranscriptome | 216 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0151677_10020536 | F022107 | GGA | MMSDQEIERKIHIAGLVGALFGFASGAGVMMLVAIIF* |
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