Scaffold Ga0153697

Basic Information
Taxon OID	3300011334 Open in IMG/M
Scaffold ID	Ga0153697_1086 Open in IMG/M
Source Dataset Name	Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Daesung
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Chunlab, Inc
Sequencing Status	Finished

Basic Information

Taxon OID

3300011334 Open in IMG/M

Scaffold ID

Ga0153697_1086 Open in IMG/M

Source Dataset Name

Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Daesung

Source Dataset Category

Metagenome

Source Dataset Use Policy

Open

Sequencing Center

Chunlab, Inc

Sequencing Status

Finished

Scaffold Components
Scaffold Length (bps)	30669
Total Scaffold Genes	49 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	10 (20.41%)
Novel Protein Genes	9 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	3 (33.33%)
Associated Families	9

Scaffold Components

Scaffold Length (bps)

30669

Total Scaffold Genes

49 (view)

Total Scaffold Genes with Ribosome Binding Sites (RBS)

10 (20.41%)

Novel Protein Genes

9 (view)

Novel Protein Genes with Ribosome Binding Sites (RBS)

3 (33.33%)

Associated Families

Taxonomy
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	(Source: UniRef50)

Taxonomy

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage

(Source: UniRef50)

Source Dataset Ecosystem
Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater → Lotic Viral Community From Han River, Hwacheon, Gangwon-Do, South Korea

Source Dataset Ecosystem

Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater → Lotic Viral Community From Han River, Hwacheon, Gangwon-Do, South Korea

Source Dataset Sampling Location
Location Name	Daesunglee, Gyeonggi-do, South Korea
Coordinates	Lat. (^o)	37.6746111	Long. (^o)	127.3841278	Alt. (m)	Depth (m)
Location on Map

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Source Dataset Sampling Location

Location Name

Daesunglee, Gyeonggi-do, South Korea

Coordinates

Lat. (^o)

37.6746111

Long. (^o)

127.3841278

Alt. (m)

Depth (m)

Location on Map

Zoom:

Associated Families

Family	Category	Number of Sequences	3D Structure?
F012871	Metagenome / Metatranscriptome	276	N
F019140	Metagenome / Metatranscriptome	231	N
F021113	Metagenome / Metatranscriptome	220	Y
F023350	Metagenome / Metatranscriptome	210	N
F028175	Metagenome / Metatranscriptome	192	Y
F036240	Metagenome / Metatranscriptome	170	N
F063704	Metagenome / Metatranscriptome	129	Y
F071242	Metagenome / Metatranscriptome	122	Y
F071250	Metagenome	122	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0153697_108618	F071250	N/A	MTLNYNKPYNQNTMKKLVTLENRVEKLLKKYKFLRNNNNALCVKVWEQQFDERKDITSNFFAMYESGKYVSADNITRIARLVKQHNVELRGTNHNDNKKKEQLIKPLLKK*
Ga0153697_108624	F012871	N/A	MYGIALPEAQLLQMLHEFIGKHFRWVTFEHFNLAFELNAANELSKKCEHFGALSVSFIGDVLTHYKPNRDKANLQIQREIAESKEQESKQLKESEMAINDDSWRRMLAEDLHNYKKGKYTVIEIRAVSLMRWLEEAKYITPDTFTDEEYALCKAKARKNIYFEQNLNKPMVERMSDRKRQLLKESIAFEGMRELYKLYLSKQ*
Ga0153697_108627	F019140	N/A	MKQTPLYESLKMTYEREREIVNSIATYFQQAKPVGDILLELSQRKDMNAKEKVYLALMIGTMMTRNDAEK*
Ga0153697_108629	F021113	GAGG	MNRNILAAILLFIGTSILWLVICWNIWGRTVANNTTTELQKQDSVINYNAGEYQMLLEETIELKEQLDYYENAQLTAKTTYKRNRDIVIIRDTINRVDFITLVNSCDSVIASDSLVIDNLKEQLNIEERKIDNLQEVVVAYEQKEDILTEQINILNVEKKKLDKQKKRRGRALIVTSSVAILSTFVLSILF*
Ga0153697_108643	F071242	N/A	MEATSKEQLQNKANAIIPCLEFIKLNIKSNSKEGRIANGKRKLKMWKHYAWKTTYISANVAIWIFILYKLLS*
Ga0153697_108645	F028175	N/A	MAITIDDQPYEYTPIGQRLIIVASSTNVANLGFRYVFDFGSFQVNVQPNASDRGILDLAPIFRENLQHDASAADASMNEEYTSVAFISCTIKEGWLVDGVFTVSGSGMADIDDVYAFLAEYQVSNGYKPDPNTRYALNGITKYLLSERTTETHKWSEAAARGLSSNWVYIPTRLADFGQLYSISNNGLLGDNIATDLFVSTYDNTNTLIEAVNYGLSADLGTISRLGAYPQNLIGGGLDFTNVKYYTIQAGESISPPIYTAASRVYCFYIVSDDCRFDNVRLGWTNTCGGVDYFNFTKKSELSFNYDRKQYQKVIGAYSDDTFSFNTYDRGATDRYVTTTKGLQINSDWVSVGEFNLLQTLCRSNDVFIINDDATLTPVLVDTQNFVIKDERYSKLYNVTLNLKYSQPVGL*
Ga0153697_108646	F036240	AGAAG	MANEQSAPNFFAVVNDMAKRFVELMQSDYRMKRKVGRNYTNAIASGTLEKSLAYRLKIKGKAIDISIYAKGKASQYFLARENGRRAGATPPPVSAILDWMRIKPIKLREKESGKFQKPTEALKKQVAFLIARKIGRDGVKGWHAFDYAFENIWDEYEAKVVAAYGKDFNAVLENELKDI*
Ga0153697_108647	F063704	N/A	MTITKYRMITENGYIETLDKQEAVEWGNYTTVTEEVPDDNG*
Ga0153697_10869	F023350	GGA	LTLEHYIEGHYKKFKELAYNIARKEPFYEDLLHDSLLSMFGSKHIENLIDTGDFEFYLIRVMYLSVNSPTSPFYKQTIAWNRNRRDFKDYAHEVDKTWLGARMTNEQLDILISRLSEFERLIFQEYILEDFTYRALSKETGIPMPFLYRTIDNIKQKIRANVIRKTQ*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Scaffold Ga0153697_1086

Overview

Ecosystem & Geography

Associated Families

Sequences