Scaffold Ga0153697

Basic Information
Taxon OID	3300011334 Open in IMG/M
Scaffold ID	Ga0153697_1132 Open in IMG/M
Source Dataset Name	Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Daesung
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Chunlab, Inc
Sequencing Status	Finished

Basic Information

Taxon OID

3300011334 Open in IMG/M

Scaffold ID

Ga0153697_1132 Open in IMG/M

Source Dataset Name

Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Daesung

Source Dataset Category

Metagenome

Source Dataset Use Policy

Open

Sequencing Center

Chunlab, Inc

Sequencing Status

Finished

Scaffold Components
Scaffold Length (bps)	26235
Total Scaffold Genes	39 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	34 (87.18%)
Novel Protein Genes	8 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	6 (75.00%)
Associated Families	8

Scaffold Components

Scaffold Length (bps)

26235

Total Scaffold Genes

39 (view)

Total Scaffold Genes with Ribosome Binding Sites (RBS)

34 (87.18%)

Novel Protein Genes

8 (view)

Novel Protein Genes with Ribosome Binding Sites (RBS)

6 (75.00%)

Associated Families

Taxonomy
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	(Source: UniRef50)

Taxonomy

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage

(Source: UniRef50)

Source Dataset Ecosystem
Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater → Lotic Viral Community From Han River, Hwacheon, Gangwon-Do, South Korea

Source Dataset Ecosystem

Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater → Lotic Viral Community From Han River, Hwacheon, Gangwon-Do, South Korea

Source Dataset Sampling Location
Location Name	Daesunglee, Gyeonggi-do, South Korea
Coordinates	Lat. (^o)	37.6746111	Long. (^o)	127.3841278	Alt. (m)	Depth (m)
Location on Map

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Source Dataset Sampling Location

Location Name

Daesunglee, Gyeonggi-do, South Korea

Coordinates

Lat. (^o)

37.6746111

Long. (^o)

127.3841278

Alt. (m)

Depth (m)

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F007170	Metagenome / Metatranscriptome	356	N
F008689	Metagenome	329	Y
F009888	Metagenome / Metatranscriptome	311	N
F043939	Metagenome	155	N
F053298	Metagenome / Metatranscriptome	141	Y
F066791	Metagenome	126	N
F078722	Metagenome	116	N
F103260	Metagenome / Metatranscriptome	101	N

Family

Sequences

Protein ID	Family	RBS	Sequence
Ga0153697_113210	F009888	N/A	LTEDPQQVVQASAWVGDWHSYVVRLVDELGSPVDITTGTLGVTFTNIATGAAYTFASGSVTLTKQYSAQGILSILNPAAYATAAMIRITVSFTVSTTVRRFGPLEIEVLAP*
Ga0153697_113212	F007170	AGG	MAYEPAVIEQWIYETLSGDATLLGLLAPDNRPNGYQMGIYNTVAPQADPISRKPVQVPYVVFSRAGSGGDDEDALCGARVFTYPNYRITVWDTESGAMSMSRIQTIMSRIDTLLDNQTVTSTTPRLYVRRVSTDQTFALSDGGRTDYGVTAVYRCLTQQ*
Ga0153697_113214	F103260	GGA	MGIKAIKAIEAEVDHGILEVDLSQWAGEGATVKFRQPKAADYFPDSADLMKLRISYADVAPNLLVNCLIIGRCYIPDIDDPQDVAFIRTLLDLSRHNTQAFYAIYWAFIYKYINVSVADEVKDAKNESTV*
Ga0153697_113216	F066791	GGCGG	MANIHPLLVQFDVPEPRPQFGRLMVPLDGTKVDLTNSNNIWQDPATLTMMLAPLPVTPAWRTTYSGSYARYQKTDYTLTTAAKWKQMQIRASGDYYLQSLDVTERATLTTAFSANQPVYLSLYVPGLKDTDKSIILKAGWGVGSAGSVEVWFAANGSAQVYKSGVLVGSYDRGDANIAPAVGTTASKSNRSDFISIMMIPARRRELIVATSNGTHFSHVFSDLSASTSNTIVPAAAFSWLVPSGQATVQLAKCAFESSGYILSNVKSLRYPPPTGATFNHTYAQDSIGIGAVTSNVTLVKADGTTYTPNGVIKDVRAKVTLTGAGTGTNGVYSVEAVYDAPVSATYDGTVDVTQYIKSLSISVDEDGKASCNIGAIAKALVDAGVEQPDVTSDRPVRIALSDGATPTPTYQDIFRGTLQPPKIEYLDRDTTYNWATYVYQGTDRSGDFDLAWLVESYPYDGITAGNAILDLMKIAGYDDSVTPYFGGDFPDQELPYTTNISKGQYSLAPDYGDTVQSYLDKIKQEYYATWITGWMPTASGYYYQWLNVNAASTASTMTLYQSIAAATTAGVTEVLRPQRVIRTLNSYYEQPECTQVTVIGQDPNTGLFIPYTQIDAAAEDADTPPATRPRNWRGRPVCYQYRDPALNTLDAVTAACLMLYSRLTPGRTMIEFDATFLVYNNSNRPVWLGDVIKLMDTDGVAVLGNYRIIAIPQIEFVQENTPGSSTLFNVRRASYRAVYVSAGT*
Ga0153697_113225	F053298	N/A	MAEWKDQQEQARQVRERNYALEAHRAAYLSRNRAIRDSIRAGVICGVSVLLLLAMIAAAKEALRYELETKPAMLKAQGVR*
Ga0153697_113229	F043939	AGG	MATPATDAGQAIAFLRHLFKPYQDGFIEIRPLSKVKPHANRTTYRLPHCLRGEEGQALTQHIMSLAMRGYDVYVGVCPRVAPEGPGRKLGKDAIEQVGAVWVDLDAKVPGSSQALLGGCDIVVSTGNGWHGYKMLASVANVKNAKERTAIETKIRSWQNSIIFDTDPVGNVDRIMRVPGTLNWKDVDNPKAVTLLKGGGIKPTYKQSLLVEHLGDARLDALLASAKQGQLGRAEPRIRHASGRITDLLDVFLLEAEEACLAFKQDSRWEYRLNIVRADLPEILEYYFGRK*
Ga0153697_113236	F008689	GGAGG	MKFGEVVEALMAGGSNAIRRQDWGGPVFLRYSELWNAFELHGPRDRVTQLEELELSPGDIFADDWDIVTLDPLTGKVAE*
Ga0153697_11325	F078722	GGTGG	MSASEYTAIGIFVTGLVVSLLVYIVQFLHRMDKRNAVDTLTIKDHGHRLGKVETDTGELKTRVTHLEARR*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Scaffold Ga0153697_1132

Overview

Ecosystem & Geography

Associated Families

Sequences