Basic Information | |
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Taxon OID | 3300012061 Open in IMG/M |
Scaffold ID | Ga0154005_103570 Open in IMG/M |
Source Dataset Name | Attine ant fungus gardens microbial communities from Florida, USA - TSFL089 MetaG |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1749 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Glycine → Glycine subgen. Soja → Glycine max | (Source: IMG/M) |
Source Dataset Ecosystem |
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Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens → Attine Ant Fungus Gardens Microbial Communities From Various Locations In Usa |
Source Dataset Sampling Location | ||||||||
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Location Name | USA: Florida, Lake Talquin State Forest | |||||||
Coordinates | Lat. (o) | 30.4649 | Long. (o) | -84.3641 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F061597 | Metagenome / Metatranscriptome | 131 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0154005_1035701 | F061597 | N/A | IYFNFGFVDCRNCKTLDKLTDQPGTLIPLDRGGVPDLSVSGNKFDLVEVDPHDPTTTSEPEAPMQSLNQLPMVTNLAAARSA* |
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