Basic Information | |
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Taxon OID | 3300012105 Open in IMG/M |
Scaffold ID | Ga0153986_1023925 Open in IMG/M |
Source Dataset Name | Attine ant fungus gardens microbial communities from Georgia, USA - TSGA070 MetaG |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 569 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | (Source: UniRef50) |
Source Dataset Ecosystem |
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Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens → Attine Ant Fungus Gardens Microbial Communities From Various Locations In Usa |
Source Dataset Sampling Location | ||||||||
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Location Name | USA: Georgia, Alexander Wildlife Management Area | |||||||
Coordinates | Lat. (o) | 33.0113 | Long. (o) | -81.8995 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F017394 | Metagenome / Metatranscriptome | 241 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0153986_10239251 | F017394 | GGGGG | MTEVLNEVACGEPDQLAPSSDIVLGGSVSQRDTPSSLAALEDRDRRYELQAQQSLTAAFFGDPLPGRSALDRRRAEQERTARQSGG* |
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