Basic Information | |
---|---|
Taxon OID | 3300012177 Open in IMG/M |
Scaffold ID | Ga0153943_1148595 Open in IMG/M |
Source Dataset Name | Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ027 MetaG |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 514 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
---|---|
Not Available | (Source: ) |
Source Dataset Ecosystem |
---|
Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens → Attine Ant Fungus Gardens Microbial Communities From Various Locations In Usa |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | USA: New Jersey, Brendan T. Byrne State Forest | |||||||
Coordinates | Lat. (o) | 39.8721 | Long. (o) | -74.5205 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F049979 | Metagenome / Metatranscriptome | 146 | N |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0153943_11485951 | F049979 | N/A | QGLSGKVSAMMQRKLILAALALVLTISSASAQENPYRLPQMPAQATSFNKLLYAYRLYAFVKDCNLAVYINEIELDRARLKVQSIEKDLLPTVSDPVPDAWVKTFFHGDTLDTVALFSEAVDSIRGMSVNSDRCHLTLRTLLAMPSSGGNMVVEKDAPRQTRTRL* |
⦗Top⦘ |