Basic Information | |
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Taxon OID | 3300012181 Open in IMG/M |
Scaffold ID | Ga0153922_1011073 Open in IMG/M |
Source Dataset Name | Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 2157 |
Total Scaffold Genes | 5 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 3 (60.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria | (Source: IMG/M) |
Source Dataset Ecosystem |
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Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens → Attine Ant Fungus Gardens Microbial Communities From Various Locations In Usa |
Source Dataset Sampling Location | ||||||||
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Location Name | USA: New Jersey, Brendon T. Byrne State Forest | |||||||
Coordinates | Lat. (o) | 39.9181 | Long. (o) | -74.5218 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F032375 | Metagenome / Metatranscriptome | 180 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0153922_10110731 | F032375 | N/A | LRYPEWQKPYHDALLEPNPQKLVQRVNEAERAILSRLQEIRIGSDNRMEAQAIEDALNGLRVLKNETVQFKRSQNAGAGYNTIGAESD* |
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