Basic Information | |
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Taxon OID | 3300012181 Open in IMG/M |
Scaffold ID | Ga0153922_1062505 Open in IMG/M |
Source Dataset Name | Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 829 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 2 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens → Attine Ant Fungus Gardens Microbial Communities From Various Locations In Usa |
Source Dataset Sampling Location | ||||||||
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Location Name | USA: New Jersey, Brendon T. Byrne State Forest | |||||||
Coordinates | Lat. (o) | 39.9181 | Long. (o) | -74.5218 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F024737 | Metagenome | 204 | Y |
F042459 | Metagenome | 158 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0153922_10625052 | F024737 | N/A | MDESLIYTDSRPRAKATGHAFGFEGNLGMPVIISGMLSVFLLTMLLNCDCAMPLFAQFLLALLPTSLTIAYIVVLRSRKPPRFDLDLFASWVNGRSFQPARIQPRHPFVPNR* |
Ga0153922_10625053 | F042459 | N/A | ALLICSCVNAAFADGAGSLDSFINPLKNGLNLIMIFGFIAGCVMVMSGFLNAKRDENWKMTVIYGIGVAGAVALMKSLFAMFGGAAGSAVMGF* |
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