Basic Information | |
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Taxon OID | 3300012188 Open in IMG/M |
Scaffold ID | Ga0136618_10353893 Open in IMG/M |
Source Dataset Name | Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ330 (21.06) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 633 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (66.67%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand → Polar Desert Microbial Communities From Antarctic Dry Valleys |
Source Dataset Sampling Location | ||||||||
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Location Name | Antarctica: Dry Valley | |||||||
Coordinates | Lat. (o) | -78.059 | Long. (o) | 163.688 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F020164 | Metagenome | 225 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0136618_103538932 | F020164 | GGAGG | MAGYLPKEWNGKRVAVRFARGRGFDARLVGDNAGGITVEPIKEEDAEEEHARSAFVPWAAVRYVQLLEEPGERPRARPKGTAAEMPEDPAP* |
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