Basic Information | |
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Taxon OID | 3300012511 Open in IMG/M |
Scaffold ID | Ga0157332_1071332 Open in IMG/M |
Source Dataset Name | Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 542 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Arabidopsis, Maize, Boechera And Miscanthus Rhizosphere Microbial Communities From Different Us Locations |
Source Dataset Sampling Location | ||||||||
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Location Name | USA: North Carolina | |||||||
Coordinates | Lat. (o) | 35.9076 | Long. (o) | -79.0506 | Alt. (m) | Depth (m) | 0 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F048618 | Metagenome | 148 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0157332_10713321 | F048618 | AGGAG | MTTPKHIFNSHSPSEVPPSARERGPYSAHHAIKGDYNGWILLLIILVVLGGAALLFAQNVAAKGKPSIQYQVST |
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