Scaffold Ga0157210

Basic Information
Taxon OID	3300012665 Open in IMG/M
Scaffold ID	Ga0157210_1000113 Open in IMG/M
Source Dataset Name	Freshwater microbial communities from Talbot River, Ontario, Canada - S11
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Molecular Research LP (MR DNA)
Sequencing Status	Permanent Draft

Basic Information

Taxon OID

3300012665 Open in IMG/M

Scaffold ID

Ga0157210_1000113 Open in IMG/M

Source Dataset Name

Freshwater microbial communities from Talbot River, Ontario, Canada - S11

Source Dataset Category

Metagenome

Source Dataset Use Policy

Open

Sequencing Center

Molecular Research LP (MR DNA)

Sequencing Status

Permanent Draft

Scaffold Components
Scaffold Length (bps)	41788
Total Scaffold Genes	69 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	58 (84.06%)
Novel Protein Genes	8 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	6 (75.00%)
Associated Families	8

Scaffold Components

Scaffold Length (bps)

41788

Total Scaffold Genes

69 (view)

Total Scaffold Genes with Ribosome Binding Sites (RBS)

58 (84.06%)

Novel Protein Genes

8 (view)

Novel Protein Genes with Ribosome Binding Sites (RBS)

6 (75.00%)

Associated Families

Taxonomy
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	(Source: UniRef50)

Taxonomy

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage

(Source: UniRef50)

Source Dataset Ecosystem
Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater → Freshwater Microbial Communities From Rivers And Streams Along An Organic Matter Gradient Associated With Agriculture In Ontario, Canada

Source Dataset Ecosystem

Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater → Freshwater Microbial Communities From Rivers And Streams Along An Organic Matter Gradient Associated With Agriculture In Ontario, Canada

Source Dataset Sampling Location
Location Name	Douro-Dummer, Ontario
Coordinates	Lat. (^o)	44.4982	Long. (^o)	-79.1546	Alt. (m)	Depth (m)
Location on Map

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Source Dataset Sampling Location

Location Name

Douro-Dummer, Ontario

Coordinates

Lat. (^o)

44.4982

Long. (^o)

-79.1546

Alt. (m)

Depth (m)

Location on Map

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Family	Category	Number of Sequences	3D Structure?
F000857	Metagenome / Metatranscriptome	858	Y
F001059	Metagenome / Metatranscriptome	790	Y
F003521	Metagenome / Metatranscriptome	481	Y
F004695	Metagenome	427	Y
F005087	Metagenome / Metatranscriptome	412	Y
F006264	Metagenome / Metatranscriptome	377	Y
F012670	Metagenome / Metatranscriptome	278	Y
F103134	Metagenome	101	Y

Family

Sequences

Protein ID	Family	RBS	Sequence
Ga0157210_100011355	F012670	GGAG	MTKDDLLFGPIREAGTNVSSEAKKADSRARYAEKKAMKIATGEREPREIKESTNPKGRPKSVVNRVTEYGSLFNKLNQERTEKGLQPLKTAMEVLIDAMQSDEIDLKDKAKIAEKLATFESSRAPIISIEHVQNIAKDEEVSADDALEDFLSAIRKV*
Ga0157210_100011357	F103134	N/A	MSYGKVISGGKQMSKGLTKGINDKLSGFEGENKRRAVVAGAVRNAFTQNPLSDNHTNNVNGGKFTVPKLPKNV*
Ga0157210_100011358	F001059	AGG	MATYDIEALKQDLPSAKELAQFVYDRAGIALDLIGKPKEEQYTVAKRALEGKNVPTEYLTQDNPYVDKKDLIPEDPMPPVPEREKDLPDRDAQVNFFGATNMPHPLDPQSDRKVHISFRKYENGAITYEVVGPLEKIAIGSRINKYGQNVPERYTWLDPRTGERMMRRPDGTLTEKGRGLYTYCVGEKGAGIWNLIDKEQVSISAKNIADPWA*
Ga0157210_100011359	F006264	N/A	MEDTANIFRTKLPNQAEACARKILEWLQKDLQGSKKLMPEEVFHLASAAETLLLMRDTYGKE*
Ga0157210_100011361	F004695	AGGA	MLDKQNIIVDHLQAEVSNKGMVFQVAHEVYLKMVDYLRLTQAKNTFNRLSDYHYLNIAVSNSTEPIRGIDYIHPVVSPGVDYATAVVTKCLMPNGKIEFEFERFTEADDVQSRQSTEMVKYMLNSKNDSYQIIRDWAQDSLLHKNGIVMVSPVREPIVQYKEVEGTRDQLRVFETMAAEKGLTPKRQNMRRIDVDLQGMMQEATMEESAEAAKDIVSANTIYRAKYKLTGYSTTVRVKHVAQHYWVCNPTIPQIQDQDFCGFYDPMTIHECKAQYPYVDIEKLSEHAAYGPAGAYQAGALENDLALHARDSTPVPGQGVIASAGADKYSRVIMLTTAWIRKDVDGDGEEEIIECCFSGSYVLYVKEVDFIPLANMCPKPIVGNFFGYSLAERLVPMQEYGTAISRAEMAFAMQASTPRIGVNPEFVDAEEIQRGVSAMFVLDRKFDATKHVYEFSPMQGNLAYVQSSMQRFESDKMAVIGMTSPSDVLNPEVMKDGNSGFKLQLAMGPNQLIQDEMVKNCAIGLRDVIYLVWKTLIQYADDYNIQQLAAACSKGQPFLDAISMDNYEFIDRRMINIDLALGFMAEENRLTRQQLITAAQQQFAQAMMMVDPSVPELFIKVRRPYEDTLRVLGVKDVDAYLPTFDEAAKLVEAKAAQGPNPEQQETMSKVALNTAKVEESKTVAALNVKKAEDIDTDNMFEALAAKRGKLSAVQVD*
Ga0157210_100011362	F003521	AGGA	MKSMLKDIRAYFNRRTRASDSFKEANVARKTLAIENGESASRLLKNEDFALLFNLYRFQMLERLEDAREDSDRLSNAYYVAGARDFIDFIEKQEYLAKKVVVETKS*
Ga0157210_100011365	F000857	AGG	MGLNANNEEALVDERYYTEGNHAAGVEIALRKNDKLYNEVKSGTWSQTFDTGNLKYTIGAQDGTRYVKYDQQNVEAVREKCKTMREFYKEHGTDNPFFAGTFHAMDLPKCFAHEISSKWFNNRPWELIKQDKQDKILFYAIVNEYYADFVCHPSGKIPIPYNPTIPVK*
Ga0157210_100011366	F005087	AGG	MTTALFIQSANSLVSRVAQWVGAIPQTVGINATAFNSATGVITCSANPSSAVLVGDFITYSLRGPYVLVTAVSSTTITVNDPDGSWDNATLPTAILKLPTQSTIEICNSIQLAELKMRTIELPALRSNPYDPVDPSILTTNAQGLSPIPADMCFPILFFQETPLANQPPGSTGLGPWIIYDRVGDREIIRRRMIDQLYVRPFGVPRVIRASFSEVGPNYVFTPTPGANVEIKAYYQRTFPFLFSPTEDAGYPVVQSNAILSSFPEGYMYGTLWAYYDKNKNTEEAQKWLSRFDDAYGLIEDQNYKGKWRGGDQHLTSEFQPRNYRYSFK*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Scaffold Ga0157210_1000113

Overview

Ecosystem & Geography

Associated Families

Sequences