Basic Information | |
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Taxon OID | 3300012678 Open in IMG/M |
Scaffold ID | Ga0136615_10165036 Open in IMG/M |
Source Dataset Name | Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ288 (22.06) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1031 |
Total Scaffold Genes | 4 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 3 (75.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand → Polar Desert Microbial Communities From Antarctic Dry Valleys |
Source Dataset Sampling Location | ||||||||
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Location Name | Antarctica: Dry Valley | |||||||
Coordinates | Lat. (o) | -78.0557 | Long. (o) | 163.7304 | Alt. (m) | Depth (m) | Location on Map | |
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Family | Category | Number of Sequences | 3D Structure? |
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F035210 | Metagenome / Metatranscriptome | 172 | N |
Protein ID | Family | RBS | Sequence |
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Ga0136615_101650362 | F035210 | GGA | VPFHSAQFALNEMSEEHVKEASWVVQSVTGASAYLYGVDYSDEKFREELRAMVEHIKRAAQEQ* |
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