Basic Information | |
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Taxon OID | 3300012774 Open in IMG/M |
Scaffold ID | Ga0138283_1032626 Open in IMG/M |
Source Dataset Name | Freshwater microbial communities from Lake Simoncouche, Canada - S_130109_E_mt (Metagenome Metatranscriptome) |
Source Dataset Category | Metatranscriptome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 510 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake → Freshwater Microbial Communities From Northern Lakes Of Canada To Study Carbon Cycling |
Source Dataset Sampling Location | ||||||||
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Location Name | Canada: Quebec | |||||||
Coordinates | Lat. (o) | 48.2311 | Long. (o) | -71.2508 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F012351 | Metagenome / Metatranscriptome | 281 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0138283_10326262 | F012351 | N/A | FADLHHLHQFISLEQGGAVTTVSTTAGTTAGEADIYFGAAHMNVDNVAEDWISDDQVSDMSAGVNGPVTRNEGMYNAYTAIKAYWSDTINMDNLRGGDATGMATPGAMEVTSDSDGVSGAGNTVHSYSGDSFY* |
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