Basic Information | |
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Taxon OID | 3300013091 Open in IMG/M |
Scaffold ID | Ga0163210_1337005 Open in IMG/M |
Source Dataset Name | Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_220m |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 529 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Bacterial And Archaeal Communities From Various Locations To Study Microbial Dark Matter (Phase Ii) |
Source Dataset Sampling Location | ||||||||
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Location Name | Rwanda: Western Province | |||||||
Coordinates | Lat. (o) | -2.0288 | Long. (o) | 29.1756 | Alt. (m) | Depth (m) | 220 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F052334 | Metagenome | 142 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0163210_13370051 | F052334 | N/A | RGKCRKLLVLLLMHHRTLGVTASKRIAVGLILVCVILLWVIFPIFITSPDLVLALTANPSTDSGCPAGSACFAVELRNRGPWPVTIEMVELQVYPSLIGPSVNVNWLGPGPDRLLVLIPFTGHSYTFWIKIMGGLRPPDRVYVILTANVTLLYASHHVVLHSGKR* |
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