Basic Information | |
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Taxon OID | 3300013628 Open in IMG/M |
Scaffold ID | Ga0118262_102156 Open in IMG/M |
Source Dataset Name | Human skin bacterial and viral communities - University of Pennsylvania - MG100549 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | University of Pennsylvania |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 543 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Pucciniomycotina → Pucciniomycetes → Pucciniales → Pucciniaceae → Puccinia → Puccinia striiformis → Puccinia striiformis f. sp. tritici → Puccinia striiformis f. sp. tritici PST-78 | (Source: UniRef50) |
Source Dataset Ecosystem |
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Host-Associated → Human → Skin → Unclassified → Unclassified → Human Skin → Human Skin Bacterial And Viral Communities - University Of Pennsylvania |
Source Dataset Sampling Location | ||||||||
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Location Name | ||||||||
Coordinates | Lat. (o) | Long. (o) | Alt. (m) | Depth (m) | Location on Map | |||
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F035626 | Metagenome / Metatranscriptome | 171 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0118262_1021561 | F035626 | GAG | MASSIVNNTVQGETFLPDQIFVFGGLALRANSLGHLEQIESYAPGRQVRFGSLNFTADIHGDLIFDGLEPLPSAPHCHDEHDLALPPNSALEAAPALAPTLNSEPTALIED |
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