Basic Information | |
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Taxon OID | 3300013769 Open in IMG/M |
Scaffold ID | Ga0119887_1003917 Open in IMG/M |
Source Dataset Name | Sewage treatment plant microbial communities from Vermont, USA - Sand_B |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Norwich University |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 5142 |
Total Scaffold Genes | 6 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 4 (66.67%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Proteobacteria | (Source: IMG/M) |
Source Dataset Ecosystem |
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Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Sewage Treatment Plant → Sewage Treatment Plant Microbial Communities From Vermont, Usa |
Source Dataset Sampling Location | ||||||||
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Location Name | USA: Vermont | |||||||
Coordinates | Lat. (o) | 43.727094 | Long. (o) | -72.425964 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F005672 | Metagenome | 393 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0119887_10039173 | F005672 | GAG | MTHPTHQLDHVTATAVDWGLSRPKELGEDERKRPLSAVAIDLNGRLKECCKSAYSPSEAAREMNRHLRLFARYGVPNPKATQLVRDLAMKAFTPHKR* |
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